Automatic analysis of microRNA microarray images using mathematical morphology

Meyenhofer, Felix (School of Engineering, Architecture and Landscape (hepia), HES-SO // University of Applied Sciences Western Switzerland) ; Schaad, Olivier (University of Geneva, Geneva, Switzerland) ; Descombes, Patrick (University of Geneva, Geneva, Switzerland) ; Kocher, Michel (School of Engineering, Architecture and Landscape (hepia), HES-SO // University of Applied Sciences Western Switzerland)

The micro array are an experimental technique for parallel determination of molecular concentration. The image analysis is an important, time consuming and error prone step of the process. We describe here an automatic procedure able to analyze the micro array data and to accurately provide the level of concentration for each microRNA (miRNA). The proposed method has the advantage, compared to commercial products, to minimize the user interaction, leading to a more reproducible data analysis.


Keywords:
Conference Type:
short paper
Faculty:
Ingénierie et Architecture
School:
HEPIA - Genève
Institute:
inSTI - Institut des Sciences et Technologies industrielles
Publisher:
Lyon, France, 22-26 August 2007
Date:
2007-08
Lyon, France
22-26 August 2007
Pagination:
4 p.
Published in:
Proceedings of 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 22-26 August 2007, Lyon, France
DOI:
ISSN:
1557-170X
ISBN:
978-1-4244-0787-3
Appears in Collection:

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 Record created 2020-05-01, last modified 2020-05-29

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